The detailed information of tRNA gene sequence


Sequence ID>CHL1899114765
Genome IDMG593045
Search identical group
Phylum/ClassViridiplantae
SpeciesDysosma delavayi (MG593045)
Start position on genome 138699
End posion on genome 137682
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccgcacgaT
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTAGAGCGTACCCCTGATAATTATGCGATGATTTATTTCACAG
GCGAGGTTTCTGGTTTAAGTCCAGGATAGCCCAACt
Downstream region at tRNA end position 
gccccaggta
Secondary structure (Cloverleaf model)
>CHL1899114765	Ile	GAT
                   T      AACt gccccaggta
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     T
      G     | | | |                 T T
      G     G A G C
        T A        G     CGATGATTTATTTCACAGGCGAGGTT
                    T + G
                    A - T
                    C   A *
                    C   T
                    C   T
                  C       A
                  T       A
                    G A T
intron: position=42, length=922
CGTCGTTGTGCTTGGGCTGTGAGGGCTCACATCCACATGGATAGTTCAATGTGCTCATCAGTGCTTGACC
CGGAGATGTGGATCATCCAAGTCACATTAGCATGGAGTACTCCTCATATTTGAACTGGAGTTTGAATCTA
AACTTCTCCTCAGGAGGATAGATGGGGTGATTCAGGCGAGATCTAATATAGATCCAACTTTGTATTCACT
CGTGGGATCCGAACAGTCCGGGGGTACCACTACGGCTCCTCTCTTCTCGAGAATCCACACATACCTTATC
AGTATATGGATAGCTATCTCTCGAACATAAGTTTAGGTTTGGCCTCAACGGGAAAATAAAATGGAGCACC
TAACAACGCATCTTCATAGACCAAGAACAACGAGATCACCCCAGAATGAAAGGGGTGACGAAGGGATCAT
ACCATTCGAGCCTTTTTTTCATGTTTTTCTCGGAGGTCTGGAGAAAGTTGCAATCAATAGGATTTCACCA
ATCCTCCCTTCCCGAAAGGAAAAACATGAAATTCTTTTTCCTTTCTGCAGGGACCAAGAAATTGGATCTA
CCCATAAGAAGAATGCTTGGTATAAATAACTCGCTTCTTGGTCTTCAACCCCCTCAGTCACTACGAACGC
CCCCGATCAGTGCAATGTGATGTGTTTGTTTATCTATCTCTTGACTCAAAATGGGAGCAGGTTTGAAAAA
TGATCCTAGAGTGTATAGGGTTGGGCCAGGAGGGTCTCTTAACGCCTTCTTTTTCCTTCTCATCGGAGTT
ATTTCACAAAGACTTGCCATGGCAAGGAAGAAGGGGGAACGAGAACACTTGGAGAGTGCAGTACAACTGA
GAGTTGTATGCTGCATTCAAGAAGGATGAATCACTACTAAAAAAGAATCAATTGATTCTCTCCCAATTGG
TTGAATCGTGGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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