The detailed information of tRNA gene sequence


Sequence ID>CHL1899100132
Genome IDAP014574
Search identical group
Phylum/ClassViridiplantae
SpeciesAmentotaxus formosana (AP014574)
Start position on genome 104221
End posion on genome 105072
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gagccctact
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGAGGTCTCTGGTTCAAGTC
CAGGATAGCCCACac
Downstream region at tRNA end position 
tacatgcgct
Secondary structure (Cloverleaf model)
>CHL1899100132	Ile	GAT
                   t      ACac tacatgcgct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G *
                    C   T
                    C   T
                  C       A
                  T       A
                    G A T
intron: position=42, length=779
CGTCGTTGTGCCTGGGCTGTGAAGGCTACTAGCCACATGGATAGTTTAATGTGCTCATCAACGCCTGACC
CAGAGATGTGGATCATCTAAGGCACAGTAGCATGGCGTACTCCTTCTGTTTGAACCAGGGTTTGAAACTG
ACTTTATTATCAGGAGGATAGATGGGGTGATTCAGGTGAGATAGAATGTAGATCAAATTTTCTATTCATT
CGTGGGATCTGGGCGGTCCCGGGTAGTCATGAATGATTCATGGCTACTTTCTTTTCGATAATTCATACAT
ATCTTATCAGTGTATAGAAGTCTATCTCTCGAGCACAGGCTGAAGTTAAGATTCAGCCTAAATGTGTAAA
AAAAAGCACCTAACAACGCATCTTCACAGACCAAGAACTACGAGATCACCCTTTTATTATAGGGTGACGG
AGGGATCATACCATTCGAGCCTTTTCCTGCTTTTTCCGGAGGATGCGGTAATTCAATAGGATTTTTGAAT
TTATCCTTCATGAAAGGAATAATGAGAAAATGAACGCAGGTAACAAGATCGAAAAAGGATCTTGGAGTGT
CTGGGATTGGGGTTAGGAGGATCTTTTAACGCCTCTTAACGCCTCCTTTTCTATTTTCATAAAATTTTTT
TACTTCTTCCTTGCGGTTGGCGAAGAAGAAGGAAGGGGAACAAACACACTTGGAGAGCGCAGTACAGCGG
AGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGTTCTATGAATGTCGCAATCATAGGTGCGATGATTTA
CTTCGCGGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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