The detailed information of tRNA gene sequence


Sequence ID>CHL1899104516
Genome IDKR296789
Search identical group
Phylum/ClassViridiplantae
SpeciesAstragalus mongholicus var. nakaianus (KR296789)
Start position on genome 97794
End posion on genome 98653
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
accacacaac
tRNA gene sequence 
GGGCTATTAGCTCAGCGGTAGAGCGCGCCCCTGATACGGGCGAGGTCTCTGGTTCAAGTC
CAGGATGGCCCAgct
Downstream region at tRNA end position 
gcgccaagga
Secondary structure (Cloverleaf model)
>CHL1899104516	Ile	GAT
                   c      Agct gcgccaagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      C     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G A T
intron: position=38, length=788 (in A-loop)
ATTGCGTCGTTGTGCCTGGACTGTGAGGGCTATCAGCCACATGGATAGTTCAATGTGCTCATCGGCGCCT
GACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTTGAACCGGGGTTTGAA
AACAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATT
CACTCGTGGGATCCGGGCGGTCCAGGGAGGACCACCGTGGCTCCTCTCCTCTCGAGAATTCATACATCCC
TTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTGAGGTTCGGCCTCAATAGAAAAAGAAAAACGG
AGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCACCCCTTTCATTTGATTCTGGGGTGAC
GGCGGGATCGTACCATTCGAGCCTTTTTTCATTTCATGCTTTTCCGGGGGGTTTGGAGAAAATTGCAATC
AATAGAATTTTACTAATCTATCTCTTGACTCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCT
AGGGTGGGGCCTGGAGGGTCTCTTAACGCCTTCTTTTTTCTTCTCATAGTGAGTTATTGCACAAAGACTT
TCCATGGTAAGGAAGAAAAAAGGGGCAACAAGCACACTTGGAGAGCGCAGTACAACGGATAGTTGTATGC
TGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGATGGACCGTAG
GTGCGATGATTTACTTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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