The detailed information of tRNA gene sequence


Sequence ID>CHL1899115126
Genome IDMG882489
Search identical group
Phylum/ClassViridiplantae
SpeciesPisum sativum subsp. elatius (MG882489)
Start position on genome 47657
End posion on genome 46903
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccacacaac
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATACGGGCGAGGTCTCTGGTTCAAGTC
CAGGATGGCCCAgct
Downstream region at tRNA end position 
gcgccaagga
Secondary structure (Cloverleaf model)
>CHL1899115126	Ile	GAT
                   c      Agct gcgccaagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G A T
intron: position=38, length=683 (in A-loop)
ATTGCGTCGTTGTGCCTGGACTGTGAGGGCTATCAGCCACATAGATAGTTCAATGTGTTCATCAGCGCCT
GACCCTGAGATGTGGACCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTTGAACCGGGGTTTGAA
ACCAAACTCCCCCTCAGGAAGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATT
CACTCGTGGGATCCGGGCGGTCCAGGGGGGACCATCATGGCTCCTCTCCTCTCGAGAATTCATACATCCC
TTATCAGTATATGGATAACTATCTCTCGAGCACAGGTTTAGGTTTGGCCTCAATGGAAAAAGAAAAACGG
AGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCACCCCTTTTATTCTGAGGTGACGGCGG
GATCGTACCATTCTCTTGACTCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCCCTTAACGTT
TTCTTTTTTCTTCTCATCAGAGTTATTCCACAAAGACTTGTCATGATAAGAAAGAAGGGGAAACAAGCAC
ACTTGGAGAGCGCAGTACAATGGATAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGA
ATCTATTGATTCTCTCCCAATTGGATGGACCGTAGGTGCGATGATTTACTTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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