The detailed information of tRNA gene sequence


Sequence ID>CHL1899115153
Genome IDMG925366
Search identical group
Phylum/ClassViridiplantae
SpeciesCremastra appendiculata (MG925366)
Start position on genome 106606
End posion on genome 107620
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccacacgac
tRNA gene sequence 
GGGCTCTTAGCTCAGTGGTAGAGCGCGCCCCTGATACGGGCGAGGTCTCTGGTTCAAGTC
CAGGATGGCCCAgct
Downstream region at tRNA end position 
gcgccaggga
Secondary structure (Cloverleaf model)
>CHL1899115153	Ile	GAT
                   c      Agct gcgccaggga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C   T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G A T
intron: position=38, length=943 (in A-loop)
ATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCTACATGGATAGTTCAATGTGCTCATCGGCGCCT
GACCCGGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTCCTCCTGTTCGAATCGGAGTTTGAA
ACCGAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGGAGATCGAACTTTCTATT
CACTCGTGGGATCCGGGCGGTCCGGGGGGGGGACCCCCACGGCTCCTCTCTTCTCGAGAATCCATACACC
CCTTATCAGTGTATGGACAGCTATCTCTCGAGCACAGGTTGGGGTTCGGCCTCAATGAGAAAATGGAGCA
CCTAACAACGCATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATC
GTACCATTCGAGCCTTTTTTTCATGCCGGAGGTCTGAAGAAAGCGGCAATCGATAGGATTTCCCGAATCC
TCCCTTCCCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCCGCAGGGACCAGGAGATTGGATCTAGCCA
TAACATAAGAAGAATGCTTGGTATAAATAACTCACTTCTTGTTTTCGACCCCCTCAGTCACTACGAGCGC
TCCCCGATCAGTGCAATGGGATGTGTCTATTTATCTATCTCTTGACTCGAAATGGGAGGAGCAGGTTTGA
AAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTCTCTTAACGCTTTCTTCTTTCTTCCCATCGG
AGTGATTTCACAAAGACTTGCCATGGTAAGGGAGAAGGGGGAACAAGCACACTTGAAGAGCGCAGTACAA
TGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAAGAATCTATTGATTCTCTCCCAA
TTGGTTGGATCGTAGGTGCGATGATTTACTTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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