The detailed information of tRNA gene sequence


Sequence ID>CHL1830000127
Genome IDFP102296
Search identical group
Phylum/ClassStramenopiles
SpeciesEctocarpus siliculosus (FP102296)
Start position on genome 94
End posion on genome 168
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaattatatT
tRNA gene sequence 
GCCCCCATCGTCTAGAGGCCTAGGACATCTCCTTTTCACGGAGGGAACAGGGATTCGAAT
TCCCTTGGGGGTAGtc
Downstream region at tRNA end position 
gtcttaatta
Secondary structure (Cloverleaf model)
>CHL1830000127	Glu	TTC
                   T      AGtc gtcttaatta
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GAAC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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