The detailed information of tRNA gene sequence


Sequence ID>CHL1830000465
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 44441
End posion on genome 44367
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aataactaaA
tRNA gene sequence 
GGGTATGTAGCTTAAAGGATAAAGTAATGGTTTCCGAAGCCAGAGACTGAGGGTTCAATT
CCCTCCTTACCTTTat
Downstream region at tRNA end position 
ggggctgtaa
Secondary structure (Cloverleaf model)
>CHL1830000465	Arg	CCG
                   A      TTat ggggctgtaa
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T
                     T   T
                     G - C          T T
                    T     C T C C C     A
      A A A        A      | | | | |     A
    G       T T C G       G A G G G     C
    G       | | | +                 T T
    A       A A G T
      T A          A     AGACT
                    A   G
                    T - A
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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