The detailed information of tRNA gene sequence


Sequence ID>C181002110
Genome IDAP017459
Search identical group
Phylum/ClassElusimicrobiota
SpeciesCandidatus Endomicrobium trichonymphae Rs-D17 [AP017459]
Start position on genome 47407
End posion on genome 47315
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggatggtgt
tRNA gene sequence 
GGAGGGGTCGCATAGCAGGTCTAGTGCGCTGGTTTGCTAAACCGGTGTACGGATGAAAAT
CCGTACCGAGAGTTCGAATCTCTCCCCCTCCGCtc
Downstream region at tRNA end position 
taattttttc
Secondary structure (Cloverleaf model)
>C181002110	Ser	GCT
                   t      GCtc taattttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
    A C G A        C      | | | | |     G
  G         T A C G       G A G A G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TGTACGGATGAAAATCCGTACC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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