The detailed information of tRNA gene sequence


Sequence ID>C181005315
Genome IDAP018685
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio rumoiensis FERM P-14531 [AP018685, AP018686]
Start position on genome 1057345
End posion on genome 1057255
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accgcaattc
tRNA gene sequence 
GGAGGGATGGCTGAGTGGTCGAAAGCACCGGTCTTGAAAACCGGCAAGGGTTAATAGCTC
TTCTAGGGTTCAAATCCCTATCCCTCCGCCA
Downstream region at tRNA end position 
cattaaaaaa
Secondary structure (Cloverleaf model)
>C181005315	Ser	TGA
                   c      GCCA cattaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CAAGGGTTAATAGCTCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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