The detailed information of tRNA gene sequence


Sequence ID>C181078492
Genome IDCP023284
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax boronicumulans J1 [CP023284]
Start position on genome 4811559
End posion on genome 4811483
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcgagagctt
tRNA gene sequence 
CGGTGTGTGGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGAAGGTTCGAA
TCCTTTCACACCGACCA
Downstream region at tRNA end position 
aaattgacag
Secondary structure (Cloverleaf model)
>C181078492	Pro	GGG
                   t      ACCA aaattgacag
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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