The detailed information of tRNA gene sequence


Sequence ID>C181192090
Genome IDCP030716
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber P13 [CP030716]
Start position on genome 705871
End posion on genome 705946
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cattttgcgc
tRNA gene sequence 
GGGCTCTTAGCTCAGCGGTTTAGAGCGCTCGCCTCACACGCGAGAGGTCCCTGGTTCAAA
TCCAGGAGGGCCCACCg
Downstream region at tRNA end position 
cttcctctca
Secondary structure (Cloverleaf model)
>C181192090	Val	CAC
                   c      ACCg cttcctctca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     G G A C C     A
      C G A        A      | | | | |     A
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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