The detailed information of tRNA gene sequence


Sequence ID>W09107727
Genome IDABLS01000021
Search identical group
Phylum/ClassAquificota
SpeciesSulfurihydrogenibium sp. YO3AOP1 [ABLS]
Start position on genome 23028
End posion on genome 22940
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcccttttgt
tRNA gene sequence 
GGAGGAGTGGCAGAGTGGACGAATGCGGGTGATTTGAAATCACTTGTGGGTTGACAGCCC
ACCGGGGGTTCGAATCCCTCCTCCTCCGCtt
Downstream region at tRNA end position 
ttatatatta
Secondary structure (Cloverleaf model)
>W09107727	Ser	TGA
                   t      GCtt ttatatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        G     TGTGGGTTGACAGCCCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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