The detailed information of tRNA gene sequence


Sequence ID>W09112206
Genome IDABXR01000002
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga piezophila KA3 [ABXR]
Start position on genome 250765
End posion on genome 250853
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggaaggacgc
tRNA gene sequence 
GGAGGCGTGTCCGAACTGGCTAAGGAGCCGGTCTCGAAAACCGGTGGGCCGTGAGGCCCT
TGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
tttttttgta
Secondary structure (Cloverleaf model)
>W09112206	Ser	CGA
                   c      GCCA tttttttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGGCCGTGAGGCCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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