The detailed information of tRNA gene sequence


Sequence ID>C191173674
Genome IDCP040003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Saccharibacteria bacterium oral taxon 488 AC001 [CP040003]
Start position on genome 24417
End posion on genome 24330
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atttttattt
tRNA gene sequence 
GGAGAGGTGCAGGAGTGGTTGAACTGGCCGCTCTCGAAAAGCGGTATGGGGCAACCCATC
GAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaatccaatc
Secondary structure (Cloverleaf model)
>C191173674	Ser	CGA
                   t      GCCA gaatccaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G A G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TATGGGGCAACCCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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