The detailed information of tRNA gene sequence


Sequence ID>W09110191
Genome IDABUX01000003
Search identical group
Phylum/ClassChloroflexota
SpeciesThermobaculum terrenum ATCC BAA-798 [ABUX]
Start position on genome 54234
End posion on genome 54332
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtattctcat
tRNA gene sequence 
GGGAGCGGAAGGGTCCCGGTGGGTTCCGCGGTCTTCAAAACCGTTGGGAGGCTAGCACTG
CTGGTCTCCGGTGGGTTCGACTCCCACGCGCTCCCGCCA
Downstream region at tRNA end position 
tattctagag
Secondary structure (Cloverleaf model)
>W09110191	SeC	TCA
                   t      GCCA tattctagag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    G       T G G G       G T G G G     C
    G       + + + |                 T T
    T       G T T C
      G G          C     TGGGAGGCTAGCACTGCTGGTCTCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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