The detailed information of tRNA gene sequence


Sequence ID>W141730199
Genome IDJNIE01000002
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis jamiesonii GBS [JNIE]
Start position on genome 422406
End posion on genome 422314
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatatattga
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCAGCACTGGAAATGCTGTGTACGGGTAACCCCC
GTACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aagcactatg
Secondary structure (Cloverleaf model)
>W141730199	Ser	GGA
                   a      GCCA aagcactatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACGGGTAACCCCCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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