The detailed information of tRNA gene sequence


Sequence ID>W141776089
Genome IDJOKI01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudorhizobium pelagicum R1-200B2 [JOKI]
Start position on genome 76683
End posion on genome 76609
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cacaacgcac
tRNA gene sequence 
GCGCCCTTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGACTC
CCCTAGGGCGTGCCA
Downstream region at tRNA end position 
cttcccctcg
Secondary structure (Cloverleaf model)
>W141776089	Glu	TTC
                   c      GCCA cttcccctcg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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