The detailed information of tRNA gene sequence


Sequence ID>W141779027
Genome IDJONL01000011
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio frigidus DSM 17176 [JONL]
Start position on genome 35352
End posion on genome 35263
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcaccaagc
tRNA gene sequence 
GGAGAGGTGTCCGAGTACGGCTTAAGGAGCACGCCTGGAAAGCGTGTTTAGTTAACGCTA
ACGGAGGTTCGAATCCTCTCCTCTCCGCCA
Downstream region at tRNA end position 
gtttggttat
Secondary structure (Cloverleaf model)
>W141779027	Ser	GGA
                   c      GCCA gtttggttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
    A T G A        G      + | | | |     G
  C         G C C T       G G A G G     C
  G           | | |                 T T
  G         A G G A
    C T T A        G     TTTAGTTAACGCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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