The detailed information of tRNA gene sequence


Sequence ID>W141779102
Genome IDJONN01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas astaxanthinifaciens DSM 22298 [JONN]
Start position on genome 1924896
End posion on genome 1924972
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accatagcgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
acacaaaggc
Secondary structure (Cloverleaf model)
>W141779102	Met	CAT
                   t      ACCA acacaaaggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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