The detailed information of tRNA gene sequence


Sequence ID>W141803632
Genome IDJPGV01000015
Search identical group
Phylum/ClassChlorobiota
Species[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
Start position on genome 177800
End posion on genome 177712
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcccaaatt
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCCTGGAAAGCGGGTAGGGTGTAACAGCC
CTCGAGGGTTCGAATCCCTCTCTCTCCGCgt
Downstream region at tRNA end position 
tacttttcac
Secondary structure (Cloverleaf model)
>W141803632	Ser	GGA
                   t      GCgt tacttttcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGGGTGTAACAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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