The detailed information of tRNA gene sequence


Sequence ID>W143002816
Genome IDAWNY01000063
Search identical group
Phylum/ClassUnclassified
SpeciesCloacimonetes bacterium JGI OTU-2 [AWNY]
Start position on genome 10378
End posion on genome 10473
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tagctttcgg
tRNA gene sequence 
TTGAGAGGTAGGAACTGGTGTTCCAGCTGGTCTTCAAAACCAGTAGTGAGCGGATAACAC
CGTTTATGGCAGGTTCGATTCCTGCCCTCTCGGCCAt
Downstream region at tRNA end position 
ttttttattt
Secondary structure (Cloverleaf model)
>W143002816	SeC(p)	TCA
                   g      CCAt ttttttattt
                     T + G
                     T + G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C G T C C     A
        T C        A      | | | | |     G
      G     A A G G       G C A G G     C
      G     |   |                   T T
      T     T C C A
        G T        G     TAGTGAGCGGATAACACCGTTTATG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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