The detailed information of tRNA gene sequence


Sequence ID>W1930003894
Genome IDFNPC01000012
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopenitus persicus DC30,IBRC 10041,KCTC 4046 [FNPC]
Start position on genome 56682
End posion on genome 56768
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcaccgtt
tRNA gene sequence 
GGCGGGGTTTCCCTAGGTTGGTCAAGGGACTGCGTTGGAACCGTAGCGTCCGCAAGGACA
CGAGTGTTCAAATCGCTCTCCTGCCGCtg
Downstream region at tRNA end position 
cgtaccgaag
Secondary structure (Cloverleaf model)
>W1930003894	Ser	GGA
                   t      GCtg cgtaccgaag
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C G C     A
    G G A T        T      | | | + |     A
  T         C C C T       G A G T G     C
  T           | | +                 T T
  G         A G G G
    G T C A        A     CGTCCGCAAGGACAC
                    C - G
                    T - A
                    G + T
                    C - G
                    G - C
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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