The detailed information of tRNA gene sequence


Sequence ID>W1920000552
Genome IDMSDW01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanohalarchaeum thermophilum HMET1 [MSDW]
Start position on genome 175758
End posion on genome 175684
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatcaattaa
tRNA gene sequence 
GGGGCCATTGGGTAGTCTGGCCTATCCTCGTGCGTTTGGGACGCATGGACACCCGTTCGA
ATCGGGTTGGCCCCAtgt
Downstream region at tRNA end position 
agaaggaagg
Secondary structure (Cloverleaf model)
>W1920000552	Pro	TGG
                   a      Atgt agaaggaagg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T G G G C     A
    C T G A        T      | | | | |     G
  T         T G G G       A C C C G     C
  G           | | +                 T T
  G         T C C T
    C C T A        C     GGAC
                    G + T
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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