The detailed information of tRNA gene sequence


Sequence ID>W1920000222
Genome IDFZNQ01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum vacuolatum DSM 8800 [FZNQ]
Start position on genome 43087
End posion on genome 43014
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cttcgcatgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCCTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCGCAGTTCGAAT
CTGCGCCGGCCCACtt
Downstream region at tRNA end position 
ttaccccacg
Secondary structure (Cloverleaf model)
>W1920000222	Pro	CGG
                   c      ACtt ttaccccacg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C G T C     A
      C G A        G      | | | | |     G
    C       T G G G       C G C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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