The detailed information of tRNA gene sequence


Sequence ID>W1920001047
Genome IDQPLN01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula sp. Atlit-120R [QPLN]
Start position on genome 1216963
End posion on genome 1217035
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtggtagtac
tRNA gene sequence 
GGGATCGTGGGGTAGCTTGGTAACCTTCGGGCCTTGGGTGCCCGCGCCCCTAGTTCAAAT
CTGGGCGATCCCAtag
Downstream region at tRNA end position 
ctggattccg
Secondary structure (Cloverleaf model)
>W1920001047	Pro	TGG
                   c      Atag ctggattccg
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     G G G T C     A
      C G A        G      | | + | |     A
    T       T G G G       C C T A G     C
    T       | | | +                 T T
    G       A C C T
      G T A        T     CGCC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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