The detailed information of tRNA gene sequence


Sequence ID>R05100088
Genome IDAP008217
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr11
Start position on genome 2514797
End posion on genome 2514871
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtattgccagaatactccatgaaattatagaggaaaaagaaaacacacaaaggcctagataaatatactaataaataattggataacatacatcaacaca
tRNA gene sequence 
TCCGTTGTCGTCCAGCGGTTAGGATATCTGGCTTTCACCCAGGAGACCCGGGTTCGATTC
CCGGCAACGGAAATT
Downstream region at tRNA end position 
tttgttttctccttttgcatgttgcagacgttgtatacgcatggagttgcaaatctcttgcgattttgaaacaagaactaaattgcgaattataaagcac
Secondary structure (Cloverleaf model)
>R05100088	Glu	TTC
                   a      AATT tttgttttctccttttgcatgttgcagacgttgtatacgcatggagttgcaaatctcttgcgattttgaaacaagaactaaattgcgaattataaagcac
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T T
                    T     G G C C C     A
      C G A        C      | | | | |     G
    G       C C T G       C C G G G     C
    G       | | | +                 T T
    T       G G A T
      T A          A     AGAC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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