The detailed information of tRNA gene sequence


Sequence ID>R05100101
Genome IDAP008217
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr11
Start position on genome 27586109
End posion on genome 27586024
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gaatacagcatatggctgaaatgtaaactagtgatgtgtcgactgtggcttggatttttatataggattatactcaacaaccgaaattaataagcattca
tRNA gene sequence 
GCTGGTTTGCCCGAGTGGTTAAGGGGGAAGACTTAAGATCTTCTGCACATGAGTGCGCGT
GGGTTCGAACCCCACAGCCAGCAAAA
Downstream region at tRNA end position 
aaaaatgtttttattttttttttacttttgaatattttttaatttttttacttcacgagttttcattaaatctactattttttattttttttcattcagt
Secondary structure (Cloverleaf model)
>R05100101	Leu	TAA
                   a      AAAA aaaaatgtttttattttttttttacttttgaatattttttaatttttttacttcacgagttttcattaaatctactattttttattttttttcattcagt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T + G
                     T - A          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      T A          G     TGCACATGAGTGCGC
                    G - C
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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