The detailed information of tRNA gene sequence


Sequence ID>R05100188
Genome IDAP008208
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr02
Start position on genome 28098846
End posion on genome 28098922
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctcatcgacacgatgtgattcacgttcaagggtagcatgtacaactacaagcaaatgagttctgtgctaagagagctaatatgaacaattagttcatccA
tRNA gene sequence 
GCTTCCGTAGCATAGTGGTAGTGCGTTCGCTTCGTAAGCGAAAGGTCGCGAGTTCGATCC
TCGCCGGGAGCTTTA
Downstream region at tRNA end position 
Ttcatatgcatgttttccttttgccgatccatcatcaccgatccatcggcagcaatggctatgatatgcatgtatgcttttgccgatccatcactccgtc
Secondary structure (Cloverleaf model)
>R05100188	Thr	CGT
                   A      TTTA Ttcatatgcatgttttccttttgccgatccatcatcaccgatccatcggcagcaatggctatgatatgcatgtatgcttttgccgatccatcactccgtc
                     G - C
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C          C T
                    T     C G C T C     A
        G A        A      | | | | |     G
      T     T A C G       G C G A G     C
      G     + | | |                 T T
      G     G T G C
        T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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