The detailed information of tRNA gene sequence


Sequence ID>W1930016033
Genome IDMHCD01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Blackburnbacteria bacterium RIFCSPLOWO2_01_FULL_41_27 [MHCD]
Start position on genome 5729
End posion on genome 5802
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
tgtccttaat
tRNA gene sequence 
GCCCGGGTAGCTCAGCAGAGAGAGCGCTTGCATAGTATGCAAGAGGTCGGTGGTTCAAGT
CCATCCTCGGGCTCat
Downstream region at tRNA end position 
aatatgtcaa
Secondary structure (Cloverleaf model)
>W1930016033	Thr	AGT
                   t      TCat aatatgtcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T G
                    T     C T A C C     A
      C G A        A      | + | | |     A
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    A       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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