The detailed information of tRNA gene sequence


Sequence ID>R05100519
Genome IDAP008214
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr08
Start position on genome 27958457
End posion on genome 27958382
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gcccaacacgaccaattttgtcaaagatcacggttaggtagcagattaaaagaaaatagtaacattttagagagatataaatacctgcacaagcagaaaa
tRNA gene sequence 
GACCGCGTGGCCTAATGGATAAGGCGCTCGCCTCCGGAGCGGGAGATTGTGGGTTCGAGT
CCCATCGTGGTCGTGT
Downstream region at tRNA end position 
ttttttttaacctttttgaactttccaactcctccgtatttctgtactagtatttcttttttccaaactaatttatttcgttgcgtcgtacattatgagt
Secondary structure (Cloverleaf model)
>R05100519	Arg	CCG
                   a      GTGT ttttttttaacctttttgaactttccaactcctccgtatttctgtactagtatttcttttttccaaactaatttatttcgttgcgtcgtacattatgagt
                     G - C
                     A - T
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T A A        G      + | | | |     G
    G       T C C G       G T G G G     C
    G       | | | |                 T T
    A       A G G C
      T A          G     AGATT
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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