The detailed information of tRNA gene sequence


Sequence ID>R05100548
Genome IDAP008215
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr09
Start position on genome 21433696
End posion on genome 21433620
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gttcaaatgctcttgatctgaagagacaaagcaattgatgtatggtgcaattctaaacgatcattgtagttatagttgatctatttcttttcattcaaaC
tRNA gene sequence 
GCCGTCCTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCC
CCACGGACGGCGTTC
Downstream region at tRNA end position 
Atttttggaagcatcatccctttttttttttttgctatatgaaggtactagaaattaccacattaaaaaggaagtatttgcagttttgcaccattagtcc
Secondary structure (Cloverleaf model)
>R05100548	Lys	TTT
                   C      GTTC Atttttggaagcatcatccctttttttttttttgctatatgaaggtactagaaattaccacattaaaaaggaagtatttgcagttttgcaccattagtcc
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G          C T
                    T     C A C C C     A
        G A        A      | | | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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