The detailed information of tRNA gene sequence


Sequence ID>R05100559
Genome IDAP008215
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr09
Start position on genome 7218575
End posion on genome 7218490
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tatcacattagatagatatcatattcatggaatacgatttactttcaagatatcacattagatagatatcatatttatggaatatgattcactttcaagT
tRNA gene sequence 
GCCTTGATGGTAAAATGGTAGACACGCGAGACTCAGAATCTCGTGCTAATAAGCGTGGAG
GTTCGAGTCCTCTTCAAGGTATAA
Downstream region at tRNA end position 
Tacggagaatgcacattcaatgagcattccccgtagaagcattccggaaatatgcgcctgacgctctcctctatcttctgaggtacttaaccacttccct
Secondary structure (Cloverleaf model)
>R05100559	Leu	CAG
                   T      ATAA Tacggagaatgcacattcaatgagcattccccgtagaagcattccggaaatatgcgcctgacgctctcctctatcttctgaggtacttaaccacttccct
                     G + T
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    G       A A T G       G G A G G     C
    G           | |                 T T
    T       A C A C
      A G          G     TGCTAATAAGCGT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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