The detailed information of tRNA gene sequence


Sequence ID>R05100581
Genome IDAP008216
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr10
Start position on genome 21148226
End posion on genome 21148302
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
atttctcggccgctgtaagtatgtgattgtcagtttggtacaagcaatacttcaaaaacgtacgcaatatgtattagtgcattacacatctacccaacaa
tRNA gene sequence
GCTGGAATAGCTCAGTTGGCTAGAGCGTATGGCTGTTAACCATAAGGTCGGAGGTTCGAG
CCCTCCTTCTAGCGAGT
Downstream region at tRNA end position
tttttgttttattttttgcaaattcagatttttatccacattcaatttcatttttctcctattcatattttctccatttgttttattttttgcaaattca
Secondary structure (Cloverleaf model)
>R05100581	Asn	GTT
                   a      GAGT tttttgttttattttttgcaaattcagatttttatccacattcaatttcatttttctcctattcatattttctccatttgttttattttttgcaaattca
                     G - C
                     C - G
                     T - A
                     G + T
                     G - C
                     A - T
                     A - T          C G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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