The detailed information of tRNA gene sequence


Sequence ID>AD03000015
Genome IDNC_003070
Search identical group
Phylum/ClassPlant
SpeciesArabidopsis thaliana
Chromosome chr1
Start position on genome 21307592
End posion on genome 21307675
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
tccttgtaatcttctacttctcactcatgatcaaaatttaggatagagaatggtatacggtttagtctattttgaaataaaagtttagtttagagaaaaa
tRNA gene sequence 
GTGGACATGCCGGAGTGGTGTTATCGGGCATAACTAGAAATCATGTGGGCTTTGCCCGCG
CAGGTTCGAATCATGCCGTTTACGttt
Downstream region at tRNA end position 
ttattttgagtgttggtaagtttttaaaattacttattgtgttttatggatcgttttagaatttgaacagttttccatcatgttactgttttcagtaaaa
Secondary structure (Cloverleaf model)
>AD03000015	Ser	AGA
                   a      Gttt ttattttgagtgttggtaagtttttaaaattacttattgtgttttatggatcgttttagaatttgaacagttttccatcatgttactgttttcagtaaaa
                     G - C
                     T - A
                     G + T
                     G + T
                     A - T
                     C - G
                     A   C          T A
                    T     C G T A C     A
    G T G A        G      | | |   |     G
  G         G G C C       G C A G G     C
  T         + | | |                 T T
  G         T C G G
    T T A          G     TGGGCTTTGCCCGC
                    C - G
                    A - T
                    T - A
                    A   C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[TAIR]

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