The detailed information of tRNA gene sequence


Sequence ID>W1910006567
Genome IDBAOS01000014
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua japonica japonica husup-a2 [BAOS]
Start position on genome 47563
End posion on genome 47471
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cattgtgttt
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGCTTAAAGCGGTGGGTTGCTAACCCATTGTCTCGCTGATAGTG
GGACCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
tttaacgatt
Secondary structure (Cloverleaf model)
>W1910006567	Ser	GCT
                   t      GCCA tttaacgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C C G G G     C
    G         | | |                 T T
    C       A A G C
      T T A        G     TGTCTCGCTGATAGTGGGACC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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