The detailed information of tRNA gene sequence


Sequence ID>W1910006665
Genome IDBBJN01000029
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalolamina rubra CBA1107 [BBJN]
Start position on genome 12646
End posion on genome 12728
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attcggccga
tRNA gene sequence 
GCCAGGATGGCCGAACGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCTTCCGGGATTCTG
GGTTCAAATCCCAGTCCTGGCGCtt
Downstream region at tRNA end position 
ctgtcgacgc
Secondary structure (Cloverleaf model)
>W1910006665	Ser	GGA
                   a      GCtt ctgtcgacgc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
        A A        G      | | | | |     A
      C     G C C G       C T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCTTCCGGGATT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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