The detailed information of tRNA gene sequence


Sequence ID>W1910006680
Genome IDBBJN01000055
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalolamina rubra CBA1107 [BBJN]
Start position on genome 30311
End posion on genome 30383
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttggtggtgc
tRNA gene sequence 
GGGACCGTGGGTTAGCCTGGTATACTTCGGGCCTTGGGTGCCCGTGACCCCGGTTCGAAT
CCGGGCGGTCCCAtca
Downstream region at tRNA end position 
tcttcgatgt
Secondary structure (Cloverleaf model)
>W1910006680	Pro	TGG
                   c      Atca tcttcgatgt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    C       T T G G       C C C G G     C
    T         | | +                 T T
    G       T A C T
      G T A        T     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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