The detailed information of tRNA gene sequence


Sequence ID>C09110729
Genome IDCP001147
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio yellowstonii DSM 11347 [CP001147]
Start position on genome 1147542
End posion on genome 1147615
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgtaaaatgt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCGTGGGTTCGAAT
CCCTTCACCTCCACtt
Downstream region at tRNA end position 
tatttttcag
Secondary structure (Cloverleaf model)
>C09110729	Ala	TGC
                   t      ACtt tatttttcag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      +   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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