The detailed information of tRNA gene sequence


Sequence ID>W1910229595
Genome IDFNYR01000049
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalohasta litchfieldiae DSM 22187 [FNYR]
Start position on genome 7739
End posion on genome 7665
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgatttaac
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTTAGAGCGCCGAGCTCATAACTCGGTGGTCGTTGGTTCGA
ATCCGACAGGGCCCAttt
Downstream region at tRNA end position 
cttcgacaaa
Secondary structure (Cloverleaf model)
>W1910229595	Met	CAT
                   c      Attt cttcgacaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A G C C     A
    C T G A        A      | | + | |     G
  T         T T C G       G T T G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    A - T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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