The detailed information of tRNA gene sequence


Sequence ID>W1910229628
Genome IDFOAD01000005
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax larsenii CDM_5 [FOAD]
Start position on genome 158753
End posion on genome 158827
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctttgtagcc
tRNA gene sequence 
GGGTTGGTGGTCTAGCTAGGTTATGACGGCTCCTTCACACGGAGCAGGTCGGCAGTTCGA
ATCTGCCCCAACCCAttt
Downstream region at tRNA end position 
tctgattcct
Secondary structure (Cloverleaf model)
>W1910229628	Val	CAC
                   c      Attt tctgattcct
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G T C     A
    T C G A        G      | | | | |     G
  A         T C T G       G G C A G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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