The detailed information of tRNA gene sequence


Sequence ID>C141011709
Genome IDCP007028
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis ruber DSM 23557 [CP007028]
Start position on genome 474255
End posion on genome 474159
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caaggaaata
tRNA gene sequence 
GGGAGAGCGTGGCAGGCTGGTGCCGCCCCGGGACTTCAAATCCCGTGAGGGGTTGCTCTG
GCAATCCCTGGAGGGTTCGATTCCCTTGCTCTCCCGCta
Downstream region at tRNA end position 
tgttttaata
Secondary structure (Cloverleaf model)
>C141011709	SeC	TCA
                   a      GCta tgttttaata
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T T
                    G     T T C C C     A
      C G G        T      + | | | |     G
    T       A C G G       G A G G G     C
    G         | | |                 T T
    G       C G C C
      T G C        C     TGAGGGGTTGCTCTGGCAATCCCTG
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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