The detailed information of tRNA gene sequence


Sequence ID>PHG14100127
Genome IDFJ848885
Search identical group
Phylum/ClassSiphoviridae
SpeciesLactococcus virus CB20 Lb338-1 (FJ848885)
Start position on genome 28068
End posion on genome 28140
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgcatatT
tRNA gene sequence 
GCGAGCATAGTATAATGGTAATGCCACAGATTCCAAACCTGTAAACGTGGGTTCGATTCC
TACTGTTCGTGTtc
Downstream region at tRNA end position 
tcctttattt
Secondary structure (Cloverleaf model)
>PHG14100127	Trp	CCA
                   T      GTtc tcctttattt
                     G + T
                     C - G
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          T T
                    T     C A T C C     A
        A A        A      | | + | |     G
      T     T A T G       G T G G G     C
      G     | | + |                 T T
      G     A T G C
        T A        C     AAAC
                    A - T
                    C - G
                    A - T
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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