The detailed information of tRNA gene sequence


Sequence ID>PHG14101038
Genome IDJN116826
Search identical group
Phylum/ClassSiphoviridae
SpeciesRhodococcus virus RGL3 Shauna1 (JN116826)
Start position on genome 46643
End posion on genome 46716
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggccggatct
tRNA gene sequence 
GGGCACGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGT
CCCTCCGGGCCTGCaa
Downstream region at tRNA end position 
atcgaaagga
Secondary structure (Cloverleaf model)
>PHG14101038	Trp	CCA
                   t      GCaa atcgaaagga
                     G + T
                     G - C
                     G - C
                     C - G
                     A   G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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