The detailed information of tRNA gene sequence


Sequence ID>PHG14102121
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 48162
End posion on genome 48088
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
cctcggcgtT
tRNA gene sequence 
AGTCGGTTTGTGTAGCGGCCAATCATACGAGGCTCTGACCCTCGTGACAGAGGTTCGAAT
CCTCTACCGACTATgc
Downstream region at tRNA end position 
gcgttcgtag
Secondary structure (Cloverleaf model)
>PHG14102121	Gln	CTG
                   T      ATgc gcgttcgtag
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C T C C     A
      C G A        T      | | | | |     G
    G       T G T G       A G A G G     C
    G         | | +                 T T
    C       T C A T
      C A A        A     TGAC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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