The detailed information of tRNA gene sequence


Sequence ID>PHG14102122
Genome IDKC292026
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HGTV-1 Gb1 (KC292026)
Start position on genome 48085
End posion on genome 48011
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccgactatgc
tRNA gene sequence 
GCGTTCGTAGCCAAATCAGGTAAGGCGTTCCGCTGATAACGGAAAGATTTGTTGGTTCAA
ATCCAACCGGACGCAtat
Downstream region at tRNA end position 
gaagcaatgc
Secondary structure (Cloverleaf model)
>PHG14102122	Ile	GAT
                   c      Atat gaagcaatgc
                     G - C
                     C - G
                     G - C
                     T - A
                     T + G
                     C - G
                     G - C          T A
                    T     C A A C C     A
      T A A        A      | | | | |     A
    C       A C C G       G T T G G     C
    A         | | |                 T T
    G       A G G C
      G T A        G     AGATTT
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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