The detailed information of tRNA gene sequence


Sequence ID>W1910547285
Genome IDFZNQ01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum vacuolatum DSM 8800 [FZNQ]
Start position on genome 14564
End posion on genome 14489
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acatgtgcgT
tRNA gene sequence 
GCCGACGTGATGTAATCCGGTGAGCATCCGGCCCTGTCACGGTCGGTATCCGGGTTCAAA
TCCCGGCGTCGGCGTgg
Downstream region at tRNA end position 
ctgcatggcc
Secondary structure (Cloverleaf model)
>W1910547285	Asp	GTC
                   T      GTgg ctgcatggcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C T A A        G      | | | | |     A
  C         T G T A       C C G G G     C
  G         + | | |                 T T
  G         G C A T
    T G A          C     GTAT
                    C - G
                    G - C
                    G + T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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