The detailed information of tRNA gene sequence


Sequence ID>W1910547289
Genome IDFZNQ01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum vacuolatum DSM 8800 [FZNQ]
Start position on genome 13533
End posion on genome 13463
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaatagtga
tRNA gene sequence 
TGCGGGATCGGATAGTGGTAGTCCACGGGGCTCATATCCCCGAGGCCCAGGTTCGATTCC
TGGTCCCGCAAtgg
Downstream region at tRNA end position 
cgggcagtcc
Secondary structure (Cloverleaf model)
>W1910547289	Met	CAT
                   a      Atgg cgggcagtcc
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     G G T C C     A
        G A        C      | | | | |     G
      T     T A G G       C C A G G     C
      G     + | | |                 T T
      G     G T C C
        T A        A     AGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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