The detailed information of tRNA gene sequence


Sequence ID>W1910568761
Genome IDJFZT01000039
Search identical group
Phylum/ClassThermoproteota
SpeciesCandidatus Acidianus copahuensis copahuensis ALE1 [JFZT]
Start position on genome 27645
End posion on genome 27569
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttcaacaa
tRNA gene sequence 
GGGCCCGTAGTCTAGCTTGGATTAGGATGCGACGTTCGGGTCGTCGTGATCCCGGGTTCA
AATCCCGGCGGGCCCACtg
Downstream region at tRNA end position 
acccattgtt
Secondary structure (Cloverleaf model)
>W1910568761	Pro	CGG
                   a      ACtg acccattgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    A T T A        G     TGATC
                    C - G
                    G - C
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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