The detailed information of tRNA gene sequence


Sequence ID>W1910568762
Genome IDJFZT01000039
Search identical group
Phylum/ClassThermoproteota
SpeciesCandidatus Acidianus copahuensis copahuensis ALE1 [JFZT]
Start position on genome 25650
End posion on genome 25575
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttcttcttgT
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGTGCTCGGCTTGCACCCGAGAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCATtg
Downstream region at tRNA end position 
cttgaacacc
Secondary structure (Cloverleaf model)
>W1910568762	Ala	TGC
                   T      ATtg cttgaacacc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | +                 T T
    G       G A G T
      G A A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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