The detailed information of tRNA gene sequence


Sequence ID>W1910572619
Genome IDJMIY01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanoperedens nitroreducens nitroreducens ANME-2d [JMIY]
Start position on genome 218040
End posion on genome 217953
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccacacccgT
tRNA gene sequence 
GCCGAGGTGGCAGAGCGGACTAACGCGGCAGGCTCGAGACCTGTTTTACCGAAAGGTAAG
CAAGGGTTCAAATCCCTTCCTCGGCGTaa
Downstream region at tRNA end position 
atttaccagc
Secondary structure (Cloverleaf model)
>W1910572619	Ser	CGA
                   T      GTaa atttaccagc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       A A G G G     C
    G           | |                 T T
    A       A C G C
      C T A        G     TTTACCGAAAGGTAAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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